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  5. MA_481619g0010

MA_481619g0010


Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 676.0)


Gene families : OG0010914 (Archaeplastida) Phylogenetic Tree(s): OG0010914_tree ,
OG_05_0008543 (LandPlants) Phylogenetic Tree(s): OG_05_0008543_tree ,
OG_06_0002335 (SeedPlants) Phylogenetic Tree(s): OG_06_0002335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_481619g0010

Target Alias Description ECC score Gene Family Method Actions
Gb_03481 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_07725 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_23075 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_25125 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
Gb_26313 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 Archaeplastida
Gb_26314 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.07 Archaeplastida
Gb_28758 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 361 388
IPR002885 Pentatricopeptide_repeat 493 518
IPR002885 Pentatricopeptide_repeat 593 617
IPR002885 Pentatricopeptide_repeat 286 333
IPR002885 Pentatricopeptide_repeat 185 231
IPR002885 Pentatricopeptide_repeat 522 567
IPR002885 Pentatricopeptide_repeat 84 130
IPR002885 Pentatricopeptide_repeat 418 465
IPR032867 DYW_dom 692 816
No external refs found!