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  5. AT5G52620

AT5G52620


Description : F-box associated ubiquitination effector family protein


Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52620
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT1G30920 No alias F-box family protein 0.05 Archaeplastida
AT1G30925 No alias phospholipase Cs 0.13 Archaeplastida
AT1G30930 No alias F-box family protein 0.09 Archaeplastida
AT1G31090 No alias F-box family protein 0.08 Archaeplastida
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.12 Archaeplastida
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.12 Archaeplastida
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT1G47800 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT1G52495 No alias No description available 0.06 Archaeplastida
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.13 Archaeplastida
AT1G53815 No alias F-box family protein 0.07 Archaeplastida
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT1G61060 No alias F-box family protein 0.1 Archaeplastida
AT2G02660 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT2G02890 No alias F-box family protein 0.05 Archaeplastida
AT2G13630 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.12 Archaeplastida
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT3G52330 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G56890 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G22791 No alias F-box family protein 0.1 Archaeplastida
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.11 Archaeplastida
AT5G44220 No alias F-box family protein 0.05 Archaeplastida
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.13 Archaeplastida
AT5G50220 No alias F-box family protein 0.06 Archaeplastida
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.13 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
CC GO:0022626 cytosolic ribosome IEP Neighborhood
CC GO:0022627 cytosolic small ribosomal subunit IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 200 333
No external refs found!