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  5. MA_48488g0010

MA_48488g0010


Description : no hits & (original description: none)


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0012750 (SeedPlants) Phylogenetic Tree(s): OG_06_0012750_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_48488g0010
Cluster HCCA: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00193810 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.03 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.02 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.02 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G48890 No alias C2H2-like zinc finger protein 0.03 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01037897001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os02g53530.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g11680.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g13600.2 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os05g14130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g42250.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
MA_110160g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_21120V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c2_32900V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
Solyc05g009380.4.1 No alias Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g077000.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g049870.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc10g078970.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e008019_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e009853_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e017009_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e030783_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e032639_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034219_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034220_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034221_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e040612_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!