MA_491986g0010


Description : histone demethylase (KDM3). transcription factor (JUMONJI)


Gene families : OG0000515 (Archaeplastida) Phylogenetic Tree(s): OG0000515_tree ,
OG_05_0000563 (LandPlants) Phylogenetic Tree(s): OG_05_0000563_tree ,
OG_06_0000492 (SeedPlants) Phylogenetic Tree(s): OG_06_0000492_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_491986g0010
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00169980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.05 Archaeplastida
LOC_Os02g58210.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003347 JmjC_dom 521 624
IPR018866 Znf-4CXXC_R1 168 234
No external refs found!