MA_49292g0010

Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 600.0)

Gene families : OG0015318 (Archaeplastida) Phylogenetic Tree(s): OG0015318_tree ,
OG_05_0015140 (LandPlants) Phylogenetic Tree(s): OG_05_0015140_tree ,
OG_06_0019191 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_49292g0010
Cluster	HCCA: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_32965	No alias	Pentatricopeptide repeat-containing protein At4g02750...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	470	594
IPR002885	Pentatricopeptide_repeat	123	150
IPR002885	Pentatricopeptide_repeat	216	263
IPR002885	Pentatricopeptide_repeat	319	333
IPR002885	Pentatricopeptide_repeat	33	59
IPR002885	Pentatricopeptide_repeat	374	395
IPR002885	Pentatricopeptide_repeat	63	93
IPR002885	Pentatricopeptide_repeat	291	316
IPR002885	Pentatricopeptide_repeat	157	186

External Links

No external refs found!