AT5G53080


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0007664 (Archaeplastida) Phylogenetic Tree(s): OG0007664_tree ,
OG_05_0007043 (LandPlants) Phylogenetic Tree(s): OG_05_0007043_tree ,
OG_06_0011250 (SeedPlants) Phylogenetic Tree(s): OG_06_0011250_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53080
Cluster HCCA: Cluster_152


Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
BP GO:0000731 DNA synthesis involved in DNA repair IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
MF GO:0008187 poly-pyrimidine tract binding IEP Neighborhood
MF GO:0008266 poly(U) RNA binding IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0016444 somatic cell DNA recombination IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019985 translesion synthesis IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0042276 error-prone translesion synthesis IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!