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Description : component PININ of RNA quality control Exon Junction complex
Gene families : OG0005056 (Archaeplastida) Phylogenetic Tree(s): OG0005056_tree ,
OG_05_0005081 (LandPlants) Phylogenetic Tree(s): OG_05_0005081_tree ,
OG_06_0005233 (SeedPlants) Phylogenetic Tree(s): OG_06_0005233_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_49744g0010 | |
| Cluster | HCCA: Cluster_501 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00173p00035440 | evm_27.TU.AmTr_v1... | RNA processing.RNA quality control Exon Junction complex... | 0.03 | Archaeplastida | |
| GSVIVT01029689001 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.03 | Archaeplastida | |
| Gb_25266 | No alias | component PININ of RNA quality control Exon Junction complex | 0.04 | Archaeplastida | |
| Gb_25267 | No alias | component PININ of RNA quality control Exon Junction complex | 0.04 | Archaeplastida | |
| Gb_25268 | No alias | component PININ of RNA quality control Exon Junction complex | 0.04 | Archaeplastida | |
| Solyc01g104560.3.1 | No alias | component PININ of RNA quality control Exon Junction complex | 0.02 | Archaeplastida | |
| Zm00001e005379_P001 | No alias | component PININ of RNA quality control Exon Junction complex | 0.04 | Archaeplastida | |
| Zm00001e012229_P001 | No alias | component PININ of RNA quality control Exon Junction complex | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006786 | Pinin_SDK_MemA | 166 | 205 |
| No external refs found! |