AT5G53270


Description : Seed maturation protein


Gene families : OG0001382 (Archaeplastida) Phylogenetic Tree(s): OG0001382_tree ,
OG_05_0026498 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0024886 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53270
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01001170001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.06 Archaeplastida
GSVIVT01017985001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.1 Archaeplastida
GSVIVT01021881001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.1 Archaeplastida
Gb_18212 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 Archaeplastida
LOC_Os03g06360.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.12 Archaeplastida
LOC_Os03g53610.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.05 Archaeplastida
LOC_Os03g53620.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os06g23350.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.11 Archaeplastida
LOC_Os10g29570.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g43140.1 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_14118g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_216273g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_326206g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_49897g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp5g18240.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g06630.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c5_27600V3.1 No alias No annotation 0.01 Archaeplastida
Pp3c6_200V3.1 No alias Seed maturation protein 0.02 Archaeplastida
Solyc09g065360.4.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.12 Archaeplastida
Solyc09g082100.3.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.12 Archaeplastida
Solyc09g082110.4.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.11 Archaeplastida
Zm00001e000449_P001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.09 Archaeplastida
Zm00001e005665_P002 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.1 Archaeplastida
Zm00001e005666_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e014959_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007275 multicellular organism development ISS Interproscan
Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP Neighborhood
CC GO:0000326 protein storage vacuole IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004462 lactoylglutathione lyase activity IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0005372 water transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006108 malate metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006829 zinc ion transport IEP Neighborhood
BP GO:0006879 cellular iron ion homeostasis IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009686 gibberellin biosynthetic process IEP Neighborhood
BP GO:0009739 response to gibberellin IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
BP GO:0010187 negative regulation of seed germination IEP Neighborhood
BP GO:0010344 seed oilbody biogenesis IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015250 water channel activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0016101 diterpenoid metabolic process IEP Neighborhood
BP GO:0016102 diterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016145 S-glycoside catabolic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016595 glutamate binding IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
BP GO:0019430 removal of superoxide radicals IEP Neighborhood
BP GO:0019759 glycosinolate catabolic process IEP Neighborhood
BP GO:0019762 glucosinolate catabolic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0030611 arsenate reductase activity IEP Neighborhood
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP Neighborhood
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
CC GO:0042807 central vacuole IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0050898 nitrile metabolic process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070524 11-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0072555 17-beta-ketosteroid reductase activity IEP Neighborhood
MF GO:0072582 17-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0080028 nitrile biosynthetic process IEP Neighborhood
BP GO:0098869 cellular oxidant detoxification IEP Neighborhood
BP GO:1990748 cellular detoxification IEP Neighborhood
InterPro domains Description Start Stop
IPR007011 SMP 96 151
IPR007011 SMP 30 87
No external refs found!