- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 416.0)
Gene families : OG0109452 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0093445 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074413 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_499381g0010 | |
| Cluster | HCCA: Cluster_197 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| CC | GO:0017119 | Golgi transport complex | IEP | Neighborhood |
| BP | GO:0032259 | methylation | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 277 | 305 |
| IPR002885 | Pentatricopeptide_repeat | 401 | 448 |
| IPR002885 | Pentatricopeptide_repeat | 201 | 231 |
| IPR002885 | Pentatricopeptide_repeat | 476 | 499 |
| IPR002885 | Pentatricopeptide_repeat | 108 | 138 |
| IPR002885 | Pentatricopeptide_repeat | 170 | 200 |
| IPR002885 | Pentatricopeptide_repeat | 341 | 370 |
| IPR002885 | Pentatricopeptide_repeat | 504 | 530 |
| IPR002885 | Pentatricopeptide_repeat | 139 | 163 |
| IPR002885 | Pentatricopeptide_repeat | 310 | 334 |
| IPR002885 | Pentatricopeptide_repeat | 78 | 106 |
| IPR002885 | Pentatricopeptide_repeat | 232 | 261 |
| No external refs found! |