Aliases : ATPMEPCRF, PMEPCRF
Description : pectin methylesterase PCR fragment F
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G53370 | |
Cluster | HCCA: Cluster_67 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00230630 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00003p00239700 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00129p00033080 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00129p00070300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00129p00073090 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.03 | Archaeplastida | |
AT2G43050 | ATPMEPCRD | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT2G45220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT2G47550 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT3G10710 | RHS12 | root hair specific 12 | 0.06 | Archaeplastida | |
AT3G43270 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT4G02320 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.06 | Archaeplastida | |
AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT5G49180 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G51490 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT5G51500 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G64640 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
GSVIVT01012639001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
GSVIVT01016667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01018620001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01026518001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01027356001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01027653001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01028040001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.09 | Archaeplastida | |
GSVIVT01028264001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01028265001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01031165001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01031667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01037349001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01038546001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Gb_05254 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Gb_10522 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_10523 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_18512 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Gb_25439 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_28387 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_35881 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_36012 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os01g65790.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os02g18650.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os02g54190.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os04g35770.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os05g29790.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os06g09340.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os08g34900.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os11g07090.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os11g08750.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_10435891g0010 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
MA_10436266g0010 | No alias | Pectinesterase 3 OS=Citrus sinensis... | 0.05 | Archaeplastida | |
MA_130858g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_18093g0010 | No alias | Pectinesterase 2.1 OS=Solanum lycopersicum... | 0.05 | Archaeplastida | |
MA_26888g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
MA_354248g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_648837g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_931259g0010 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Mp6g15150.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Mp8g00060.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c10_25030V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.06 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.09 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.08 | Archaeplastida | |
Pp3c4_22420V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Smo114014 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Smo420760 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Solyc01g091050.4.1 | No alias | pectin methylesterase | 0.07 | Archaeplastida | |
Solyc01g099950.1.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc01g099960.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc02g080200.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc02g080220.3.1 | No alias | pectin methylesterase | 0.07 | Archaeplastida | |
Solyc02g081990.3.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc03g078100.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083360.3.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc03g123620.4.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Solyc06g009190.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc07g017600.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc07g064190.3.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc09g075350.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e009863_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e011069_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e017514_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e017515_P001 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Zm00001e025576_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e026790_P001 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Zm00001e041006_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e041757_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006612 | protein targeting to membrane | RCA | Interproscan |
BP | GO:0006833 | water transport | RCA | Interproscan |
BP | GO:0009651 | response to salt stress | RCA | Interproscan |
BP | GO:0009750 | response to fructose | RCA | Interproscan |
BP | GO:0009963 | positive regulation of flavonoid biosynthetic process | RCA | Interproscan |
BP | GO:0010363 | regulation of plant-type hypersensitive response | RCA | Interproscan |
MF | GO:0030599 | pectinesterase activity | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Neighborhood |
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0000103 | sulfate assimilation | IEP | Neighborhood |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0001871 | pattern binding | IEP | Neighborhood |
BP | GO:0002238 | response to molecule of fungal origin | IEP | Neighborhood |
MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Neighborhood |
MF | GO:0004351 | glutamate decarboxylase activity | IEP | Neighborhood |
MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
MF | GO:0004675 | transmembrane receptor protein serine/threonine kinase activity | IEP | Neighborhood |
MF | GO:0004779 | sulfate adenylyltransferase activity | IEP | Neighborhood |
MF | GO:0004781 | sulfate adenylyltransferase (ATP) activity | IEP | Neighborhood |
MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Neighborhood |
CC | GO:0005886 | plasma membrane | IEP | Neighborhood |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
BP | GO:0006109 | regulation of carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
BP | GO:0006534 | cysteine metabolic process | IEP | Neighborhood |
BP | GO:0006536 | glutamate metabolic process | IEP | Neighborhood |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Neighborhood |
BP | GO:0006598 | polyamine catabolic process | IEP | Neighborhood |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
BP | GO:0007389 | pattern specification process | IEP | Neighborhood |
MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
MF | GO:0008172 | S-methyltransferase activity | IEP | Neighborhood |
MF | GO:0008374 | O-acyltransferase activity | IEP | Neighborhood |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
MF | GO:0008705 | methionine synthase activity | IEP | Neighborhood |
BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Neighborhood |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | Neighborhood |
BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
BP | GO:0009269 | response to desiccation | IEP | Neighborhood |
BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
BP | GO:0009310 | amine catabolic process | IEP | Neighborhood |
BP | GO:0009411 | response to UV | IEP | Neighborhood |
BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
BP | GO:0009607 | response to biotic stimulus | IEP | Neighborhood |
BP | GO:0009611 | response to wounding | IEP | Neighborhood |
BP | GO:0009625 | response to insect | IEP | Neighborhood |
BP | GO:0009683 | indoleacetic acid metabolic process | IEP | Neighborhood |
BP | GO:0009684 | indoleacetic acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009698 | phenylpropanoid metabolic process | IEP | Neighborhood |
BP | GO:0009699 | phenylpropanoid biosynthetic process | IEP | Neighborhood |
BP | GO:0009718 | anthocyanin-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0009804 | coumarin metabolic process | IEP | Neighborhood |
BP | GO:0009805 | coumarin biosynthetic process | IEP | Neighborhood |
BP | GO:0009808 | lignin metabolic process | IEP | Neighborhood |
BP | GO:0009809 | lignin biosynthetic process | IEP | Neighborhood |
BP | GO:0009834 | plant-type secondary cell wall biogenesis | IEP | Neighborhood |
BP | GO:0009850 | auxin metabolic process | IEP | Neighborhood |
BP | GO:0009851 | auxin biosynthetic process | IEP | Neighborhood |
BP | GO:0010038 | response to metal ion | IEP | Neighborhood |
BP | GO:0010252 | auxin homeostasis | IEP | Neighborhood |
BP | GO:0010337 | regulation of salicylic acid metabolic process | IEP | Neighborhood |
BP | GO:0010417 | glucuronoxylan biosynthetic process | IEP | Neighborhood |
BP | GO:0010565 | regulation of cellular ketone metabolic process | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
BP | GO:0016143 | S-glycoside metabolic process | IEP | Neighborhood |
BP | GO:0016144 | S-glycoside biosynthetic process | IEP | Neighborhood |
MF | GO:0016207 | 4-coumarate-CoA ligase activity | IEP | Neighborhood |
MF | GO:0016405 | CoA-ligase activity | IEP | Neighborhood |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0016621 | cinnamoyl-CoA reductase activity | IEP | Neighborhood |
MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
MF | GO:0016878 | acid-thiol ligase activity | IEP | Neighborhood |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
MF | GO:0019199 | transmembrane receptor protein kinase activity | IEP | Neighborhood |
BP | GO:0019344 | cysteine biosynthetic process | IEP | Neighborhood |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
BP | GO:0019748 | secondary metabolic process | IEP | Neighborhood |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
BP | GO:0019757 | glycosinolate metabolic process | IEP | Neighborhood |
BP | GO:0019758 | glycosinolate biosynthetic process | IEP | Neighborhood |
BP | GO:0019760 | glucosinolate metabolic process | IEP | Neighborhood |
BP | GO:0019761 | glucosinolate biosynthetic process | IEP | Neighborhood |
MF | GO:0019825 | oxygen binding | IEP | Neighborhood |
MF | GO:0030247 | polysaccharide binding | IEP | Neighborhood |
CC | GO:0031225 | anchored component of membrane | IEP | Neighborhood |
BP | GO:0032350 | regulation of hormone metabolic process | IEP | Neighborhood |
BP | GO:0032504 | multicellular organism reproduction | IEP | Neighborhood |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
BP | GO:0034754 | cellular hormone metabolic process | IEP | Neighborhood |
MF | GO:0042084 | 5-methyltetrahydrofolate-dependent methyltransferase activity | IEP | Neighborhood |
MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Neighborhood |
BP | GO:0042402 | cellular biogenic amine catabolic process | IEP | Neighborhood |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0042435 | indole-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
BP | GO:0043207 | response to external biotic stimulus | IEP | Neighborhood |
BP | GO:0043255 | regulation of carbohydrate biosynthetic process | IEP | Neighborhood |
MF | GO:0043425 | bHLH transcription factor binding | IEP | Neighborhood |
BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Neighborhood |
BP | GO:0044106 | cellular amine metabolic process | IEP | Neighborhood |
BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Neighborhood |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
BP | GO:0046686 | response to cadmium ion | IEP | Neighborhood |
MF | GO:0047172 | shikimate O-hydroxycinnamoyltransferase activity | IEP | Neighborhood |
MF | GO:0047205 | quinate O-hydroxycinnamoyltransferase activity | IEP | Neighborhood |
MF | GO:0047262 | polygalacturonate 4-alpha-galacturonosyltransferase activity | IEP | Neighborhood |
CC | GO:0048046 | apoplast | IEP | Neighborhood |
BP | GO:0048878 | chemical homeostasis | IEP | Neighborhood |
MF | GO:0050734 | hydroxycinnamoyltransferase activity | IEP | Neighborhood |
MF | GO:0050737 | O-hydroxycinnamoyltransferase activity | IEP | Neighborhood |
BP | GO:0051704 | multi-organism process | IEP | Neighborhood |
BP | GO:0051707 | response to other organism | IEP | Neighborhood |
BP | GO:0052386 | cell wall thickening | IEP | Neighborhood |
BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
MF | GO:0070566 | adenylyltransferase activity | IEP | Neighborhood |
BP | GO:0070838 | divalent metal ion transport | IEP | Neighborhood |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Neighborhood |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Neighborhood |
MF | GO:0080030 | methyl indole-3-acetate esterase activity | IEP | Neighborhood |
MF | GO:0080032 | methyl jasmonate esterase activity | IEP | Neighborhood |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Neighborhood |
BP | GO:1903338 | regulation of cell wall organization or biogenesis | IEP | Neighborhood |
BP | GO:2000652 | regulation of secondary cell wall biogenesis | IEP | Neighborhood |
No external refs found! |