AT5G53635


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53635
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G13780 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT1G16940 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 Archaeplastida
AT1G32020 No alias F-box family protein 0.07 Archaeplastida
AT1G60400 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT1G78760 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G23955 No alias F-box family protein 0.05 Archaeplastida
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.05 Archaeplastida
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 Archaeplastida
AT5G22720 No alias F-box/RNI-like superfamily protein 0.1 Archaeplastida
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G44940 No alias F-box/RNI-like superfamily protein 0.11 Archaeplastida
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.08 Archaeplastida
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0072488 ammonium transmembrane transport IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 149 174
IPR001810 F-box_dom 2 38
IPR006566 FBD 359 403
No external refs found!