Description : CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G53635.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G53640 | |
Cluster | HCCA: Cluster_57 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G32020 | No alias | F-box family protein | 0.02 | Archaeplastida | |
AT1G60400 | No alias | F-box/RNI-like superfamily protein | 0.02 | Archaeplastida | |
AT1G60410 | No alias | F-box family protein | 0.02 | Archaeplastida | |
AT1G66640 | No alias | RNI-like superfamily protein | 0.04 | Archaeplastida | |
AT1G80470 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.02 | Archaeplastida | |
AT5G53840 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005575 | cellular_component | ND | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
MF | GO:0005484 | SNAP receptor activity | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Neighborhood |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
CC | GO:0009330 | DNA topoisomerase complex (ATP-hydrolyzing) | IEP | Neighborhood |
BP | GO:0015919 | peroxisomal membrane transport | IEP | Neighborhood |
BP | GO:0016558 | protein import into peroxisome matrix | IEP | Neighborhood |
BP | GO:0022406 | membrane docking | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
CC | GO:0044448 | cell cortex part | IEP | Neighborhood |
BP | GO:0048235 | pollen sperm cell differentiation | IEP | Neighborhood |
BP | GO:0048278 | vesicle docking | IEP | Neighborhood |
BP | GO:0051641 | cellular localization | IEP | Neighborhood |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
CC | GO:0099023 | tethering complex | IEP | Neighborhood |
BP | GO:0140029 | exocytic process | IEP | Neighborhood |
BP | GO:0140056 | organelle localization by membrane tethering | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
No external refs found! |