1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_5151g0020

MA_5151g0020


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 515.0)


Gene families : OG0013909 (Archaeplastida) Phylogenetic Tree(s): OG0013909_tree ,
OG_05_0011972 (LandPlants) Phylogenetic Tree(s): OG_05_0011972_tree ,
OG_06_0012004 (SeedPlants) Phylogenetic Tree(s): OG_06_0012004_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5151g0020
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Gb_02723 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Gb_24666 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida
MA_15061g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
MA_3947g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 502 550
IPR002885 Pentatricopeptide_repeat 269 316
IPR002885 Pentatricopeptide_repeat 400 448
IPR002885 Pentatricopeptide_repeat 223 263
IPR002885 Pentatricopeptide_repeat 122 169
IPR002885 Pentatricopeptide_repeat 344 370
IPR002885 Pentatricopeptide_repeat 96 116
IPR002885 Pentatricopeptide_repeat 576 600
No external refs found!