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  5. MA_51624g0010

MA_51624g0010


Description : transcription factor (MADS/AGL)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_51624g0010
Cluster HCCA: Cluster_328

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00109320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01012250001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01018450001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Gb_15398 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Gb_16301 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_28337 No alias MADS-box transcription factor 6 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os03g54170.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os08g41960.1 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
MA_130755g0010 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
MA_20180g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_43075g0010 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
MA_491676g0010 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
MA_9771g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc01g150167.1.1 No alias MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.01 Archaeplastida
Solyc02g065730.2.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc07g055920.4.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc11g010570.2.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e026007_P004 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030373_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e032487_P001 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
Zm00001e036422_P002 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000123 positive regulation of stomatal complex development IEP Neighborhood
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!