AT5G53950 (ATCUC2, ANAC098, CUC2)

Aliases : ATCUC2, ANAC098, CUC2

Description : NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G53950
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00252470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.03	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01013419001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.11	Archaeplastida
GSVIVT01014287001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
Gb_01126	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_13957	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_27819	No alias	transcription factor (KNOX). transcription factor (NAC)	0.02	Archaeplastida
LOC_Os02g15340.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g41450.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os03g42630.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os04g45340.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os06g23650.1	No alias	transcription factor (NAC)	0.11	Archaeplastida
LOC_Os06g33940.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os08g02300.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os08g40030.1	No alias	transcription factor (NAC)	0.13	Archaeplastida
LOC_Os09g24560.1	No alias	transcription factor (NAC)	0.08	Archaeplastida
LOC_Os09g38010.2	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_10426704g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_21732g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_40991g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c26_13950V3.1	No alias	NAC 007	0.03	Archaeplastida
Pp3c27_7560V3.1	No alias	NAC domain containing protein 38	0.02	Archaeplastida
Pp3c3_25610V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Solyc02g036430.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc06g065410.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.08	Archaeplastida
Solyc07g066330.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc08g079120.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc11g018660.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.1	Archaeplastida
Zm00001e007411_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e023108_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.09	Archaeplastida
Zm00001e031694_P001	No alias	No annotation	0.02	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001763	morphogenesis of a branching structure	None	Extended
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
BP	GO:0003156	regulation of animal organ formation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007275	multicellular organism development	ISS	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0010014	meristem initiation	None	Extended
BP	GO:0010072	primary shoot apical meristem specification	IGI	Interproscan
BP	GO:0010160	formation of animal organ boundary	IGI	Interproscan
BP	GO:0010223	secondary shoot formation	IMP	Interproscan
BP	GO:0010346	shoot axis formation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040034	regulation of development, heterochronic	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048366	leaf development	IMP	Interproscan
BP	GO:0048504	regulation of timing of animal organ formation	IMP	Interproscan
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048859	formation of anatomical boundary	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0090421	embryonic meristem initiation	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000027	regulation of animal organ morphogenesis	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Neighborhood
BP	GO:0000280	nuclear division	IEP	Neighborhood
CC	GO:0000790	nuclear chromatin	IEP	Neighborhood
BP	GO:0000911	cytokinesis by cell plate formation	IEP	Neighborhood
BP	GO:0001708	cell fate specification	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0001872	(1->3)-beta-D-glucan binding	IEP	Neighborhood
BP	GO:0002237	response to molecule of bacterial origin	IEP	Neighborhood
BP	GO:0002252	immune effector process	IEP	Neighborhood
BP	GO:0002376	immune system process	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0004860	protein kinase inhibitor activity	IEP	Neighborhood
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005504	fatty acid binding	IEP	Neighborhood
CC	GO:0005640	nuclear outer membrane	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006304	DNA modification	IEP	Neighborhood
BP	GO:0006305	DNA alkylation	IEP	Neighborhood
BP	GO:0006306	DNA methylation	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006342	chromatin silencing	IEP	Neighborhood
BP	GO:0006346	methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0007017	microtubule-based process	IEP	Neighborhood
BP	GO:0007051	spindle organization	IEP	Neighborhood
BP	GO:0007267	cell-cell signaling	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
BP	GO:0008283	cell proliferation	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009615	response to virus	IEP	Neighborhood
BP	GO:0009616	virus induced gene silencing	IEP	Neighborhood
BP	GO:0009641	shade avoidance	IEP	Neighborhood
BP	GO:0009799	specification of symmetry	IEP	Neighborhood
BP	GO:0009845	seed germination	IEP	Neighborhood
BP	GO:0009855	determination of bilateral symmetry	IEP	Neighborhood
BP	GO:0009887	animal organ morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Neighborhood
BP	GO:0009955	adaxial/abaxial pattern specification	IEP	Neighborhood
BP	GO:0010016	shoot system morphogenesis	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010051	xylem and phloem pattern formation	IEP	Neighborhood
BP	GO:0010052	guard cell differentiation	IEP	Neighborhood
BP	GO:0010073	meristem maintenance	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010103	stomatal complex morphogenesis	IEP	Neighborhood
BP	GO:0010148	transpiration	IEP	Neighborhood
BP	GO:0010158	abaxial cell fate specification	IEP	Neighborhood
BP	GO:0010159	specification of animal organ position	IEP	Neighborhood
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IEP	Neighborhood
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	Neighborhood
BP	GO:0010338	leaf formation	IEP	Neighborhood
BP	GO:0010374	stomatal complex development	IEP	Neighborhood
BP	GO:0010450	inflorescence meristem growth	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
BP	GO:0016246	RNA interference	IEP	Neighborhood
BP	GO:0016441	posttranscriptional gene silencing	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
BP	GO:0016572	histone phosphorylation	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	Neighborhood
MF	GO:0019210	kinase inhibitor activity	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0023052	signaling	IEP	Neighborhood
BP	GO:0030155	regulation of cell adhesion	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
MF	GO:0030332	cyclin binding	IEP	Neighborhood
BP	GO:0030422	production of siRNA involved in RNA interference	IEP	Neighborhood
BP	GO:0031047	gene silencing by RNA	IEP	Neighborhood
BP	GO:0031048	chromatin silencing by small RNA	IEP	Neighborhood
BP	GO:0031050	dsRNA fragmentation	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	Neighborhood
CC	GO:0031965	nuclear membrane	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
BP	GO:0032506	cytokinetic process	IEP	Neighborhood
MF	GO:0033293	monocarboxylic acid binding	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
BP	GO:0035194	posttranscriptional gene silencing by RNA	IEP	Neighborhood
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	IEP	Neighborhood
BP	GO:0035265	organ growth	IEP	Neighborhood
BP	GO:0035266	meristem growth	IEP	Neighborhood
BP	GO:0035821	modification of morphology or physiology of other organism	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0040009	regulation of growth rate	IEP	Neighborhood
BP	GO:0040029	regulation of gene expression, epigenetic	IEP	Neighborhood
BP	GO:0042127	regulation of cell proliferation	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
BP	GO:0044003	modification by symbiont of host morphology or physiology	IEP	Neighborhood
BP	GO:0044419	interspecies interaction between organisms	IEP	Neighborhood
BP	GO:0044728	DNA methylation or demethylation	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
BP	GO:0045165	cell fate commitment	IEP	Neighborhood
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	Neighborhood
BP	GO:0045892	negative regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0045927	positive regulation of growth	IEP	Neighborhood
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0046620	regulation of organ growth	IEP	Neighborhood
BP	GO:0046622	positive regulation of organ growth	IEP	Neighborhood
BP	GO:0048281	inflorescence morphogenesis	IEP	Neighborhood
BP	GO:0048285	organelle fission	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048439	flower morphogenesis	IEP	Neighborhood
BP	GO:0048443	stamen development	IEP	Neighborhood
BP	GO:0048449	floral organ formation	IEP	Neighborhood
BP	GO:0048451	petal formation	IEP	Neighborhood
BP	GO:0048453	sepal formation	IEP	Neighborhood
BP	GO:0048479	style development	IEP	Neighborhood
BP	GO:0048480	stigma development	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048509	regulation of meristem development	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048523	negative regulation of cellular process	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048609	multicellular organismal reproductive process	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0048639	positive regulation of developmental growth	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051225	spindle assembly	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051567	histone H3-K9 methylation	IEP	Neighborhood
BP	GO:0051607	defense response to virus	IEP	Neighborhood
BP	GO:0051701	interaction with host	IEP	Neighborhood
BP	GO:0051817	modification of morphology or physiology of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052018	modulation by symbiont of RNA levels in host	IEP	Neighborhood
BP	GO:0052249	modulation of RNA levels in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0061647	histone H3-K9 modification	IEP	Neighborhood
BP	GO:0065001	specification of axis polarity	IEP	Neighborhood
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	IEP	Neighborhood
BP	GO:0070925	organelle assembly	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:0090558	plant epidermis development	IEP	Neighborhood
BP	GO:0090626	plant epidermis morphogenesis	IEP	Neighborhood
BP	GO:0090691	formation of plant organ boundary	IEP	Neighborhood
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
BP	GO:0098586	cellular response to virus	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1902410	mitotic cytokinetic process	IEP	Neighborhood
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903047	mitotic cell cycle process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	18	144

External Links

No external refs found!

AT5G53950 (ATCUC2, ANAC098, CUC2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation