AT5G53980 (ATHB52, HB52)


Aliases : ATHB52, HB52

Description : homeobox protein 52


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0017027 (SeedPlants) Phylogenetic Tree(s): OG_06_0017027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53980
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00253290 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G27045 No alias Homeobox-leucine zipper protein family 0.05 Archaeplastida
AT3G01220 ATHB20, HB20 homeobox protein 20 0.08 Archaeplastida
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.04 Archaeplastida
GSVIVT01019012001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01020033001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01027407001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_04698 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
LOC_Os02g43330.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os03g07450.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os03g08960.1 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
LOC_Os03g10210.1 No alias transcription factor (HD-ZIP I/II) 0.08 Archaeplastida
LOC_Os04g45810.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os07g39320.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
LOC_Os08g32080.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os08g32085.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os09g21180.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
LOC_Os09g35910.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os10g23090.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
LOC_Os10g26500.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
MA_10428916g0010 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
MA_19453g0050 No alias Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.09 Archaeplastida
MA_3688g0010 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Pp3c11_23440V3.1 No alias homeobox 1 0.02 Archaeplastida
Pp3c12_21760V3.1 No alias homeobox protein 16 0.02 Archaeplastida
Pp3c16_21410V3.1 No alias homeobox 1 0.02 Archaeplastida
Pp3c17_18190V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c1_37070V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c3_37710V3.1 No alias homeobox 3 0.02 Archaeplastida
Pp3c6_2730V3.1 No alias Homeobox-leucine zipper protein family 0.03 Archaeplastida
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.04 Archaeplastida
Pp3c8_440V3.1 No alias homeobox 3 0.02 Archaeplastida
Solyc01g010600.4.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc02g067410.2.1 No alias transcription factor (HD-ZIP I/II) 0.1 Archaeplastida
Solyc02g077590.1.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc02g086930.4.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc02g087840.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc03g034130.4.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc03g082550.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc05g006980.3.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Solyc05g051460.3.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc07g062790.1.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc09g008810.3.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Zm00001e004824_P001 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0009637 response to blue light IEP Interproscan
BP GO:0009646 response to absence of light IEP Interproscan
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
MF GO:0004792 thiosulfate sulfurtransferase activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005372 water transmembrane transporter activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006649 phospholipid transfer to membrane IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006833 water transport IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
BP GO:0007088 regulation of mitotic nuclear division IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009650 UV protection IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009720 detection of hormone stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009726 detection of endogenous stimulus IEP Neighborhood
BP GO:0009727 detection of ethylene stimulus IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009735 response to cytokinin IEP Neighborhood
BP GO:0009739 response to gibberellin IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010114 response to red light IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0010500 transmitting tissue development IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0010948 negative regulation of cell cycle process IEP Neighborhood
MF GO:0015250 water channel activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016630 protochlorophyllide reductase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016783 sulfurtransferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0030104 water homeostasis IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0030497 fatty acid elongation IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
MF GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity IEP Neighborhood
BP GO:0042044 fluid transport IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0042891 antibiotic transport IEP Neighborhood
CC GO:0043674 columella IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044462 external encapsulating structure part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0045839 negative regulation of mitotic nuclear division IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0045930 negative regulation of mitotic cell cycle IEP Neighborhood
BP GO:0046620 regulation of organ growth IEP Neighborhood
BP GO:0046622 positive regulation of organ growth IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048462 carpel formation IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048639 positive regulation of developmental growth IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048825 cotyledon development IEP Neighborhood
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051181 cofactor transport IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
BP GO:0051783 regulation of nuclear division IEP Neighborhood
BP GO:0051784 negative regulation of nuclear division IEP Neighborhood
MF GO:0052736 beta-glucanase activity IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070542 response to fatty acid IEP Neighborhood
BP GO:0071398 cellular response to fatty acid IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
BP GO:0080126 ovary septum development IEP Neighborhood
BP GO:0080170 hydrogen peroxide transmembrane transport IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1905328 plant septum development IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 9 64
No external refs found!