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  5. MA_52869g0010

MA_52869g0010


Description : no hits & (original description: none)


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0016438 (SeedPlants) Phylogenetic Tree(s): OG_06_0016438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_52869g0010
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00106380 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
AT1G30350 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G67750 No alias Pectate lyase family protein 0.04 Archaeplastida
AT3G07010 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
AT4G13710 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
AT5G55720 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G63180 No alias Pectin lyase-like superfamily protein 0.17 Archaeplastida
GSVIVT01008053001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
GSVIVT01011348001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
GSVIVT01020067001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
LOC_Os04g05050.1 No alias pectate lyase 0.01 Archaeplastida
LOC_Os06g38510.2 No alias pectate lyase 0.01 Archaeplastida
LOC_Os10g31910.1 No alias pectate lyase 0.02 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
Smo81909 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.01 Archaeplastida
Solyc03g113150.3.1 No alias pectate lyase 0.07 Archaeplastida
Zm00001e004654_P002 No alias pectate lyase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!