MA_53569g0010


Description : deubiquitinase (UBP23)


Gene families : OG0000242 (Archaeplastida) Phylogenetic Tree(s): OG0000242_tree ,
OG_05_0003382 (LandPlants) Phylogenetic Tree(s): OG_05_0003382_tree ,
OG_06_0003848 (SeedPlants) Phylogenetic Tree(s): OG_06_0003848_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_53569g0010
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000696001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
GSVIVT01001911001 No alias No description available 0.04 Archaeplastida
GSVIVT01001912001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
GSVIVT01009158001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
GSVIVT01038082001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
Gb_38396 No alias deubiquitinase (UBP15-21) 0.03 Archaeplastida
LOC_Os05g43480.1 No alias deubiquitinase (UBP25) 0.04 Archaeplastida
LOC_Os08g37350.1 No alias deubiquitinase (UBP15-21) 0.03 Archaeplastida
LOC_Os09g28940.1 No alias deubiquitinase (UBP15-21) 0.04 Archaeplastida
Mp2g05560.1 No alias deubiquitinase (UBP15-21) 0.03 Archaeplastida
Pp3c5_25690V3.1 No alias ubiquitin-specific protease 18 0.03 Archaeplastida
Pp3c6_5860V3.1 No alias ubiquitin-specific protease 18 0.02 Archaeplastida
Solyc04g076210.3.1 No alias deubiquitinase (UBP15-21) 0.03 Archaeplastida
Solyc07g056520.3.1 No alias deubiquitinase (UBP25) 0.03 Archaeplastida
Zm00001e014332_P001 No alias deubiquitinase (UBP15-21) 0.03 Archaeplastida
Zm00001e022516_P001 No alias deubiquitinase (UBP15-21) 0.04 Archaeplastida
Zm00001e024878_P003 No alias deubiquitinase (UBP15-21) 0.03 Archaeplastida
Zm00001e027381_P003 No alias deubiquitinase (UBP25) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 47 276
No external refs found!