Description : component psRPL6 of large ribosomal subunit proteome
Gene families : OG0002223 (Archaeplastida) Phylogenetic Tree(s): OG0002223_tree ,
OG_05_0005828 (LandPlants) Phylogenetic Tree(s): OG_05_0005828_tree ,
OG_06_0007430 (SeedPlants) Phylogenetic Tree(s): OG_06_0007430_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_54628g0010 | |
Cluster | HCCA: Cluster_145 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00062p00057610 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.05 | Archaeplastida | |
AT1G05190 | emb2394 | Ribosomal protein L6 family | 0.09 | Archaeplastida | |
Cre09.g415950 | No alias | Protein biosynthesis.organelle translation... | 0.05 | Archaeplastida | |
GSVIVT01030599001 | No alias | Protein biosynthesis.organelle translation... | 0.06 | Archaeplastida | |
Gb_27916 | No alias | component psRPL6 of large ribosomal subunit proteome | 0.06 | Archaeplastida | |
LOC_Os03g24020.1 | No alias | component psRPL6 of large ribosomal subunit proteome | 0.06 | Archaeplastida | |
LOC_Os03g54040.1 | No alias | component psRPL6 of large ribosomal subunit proteome | 0.05 | Archaeplastida | |
Mp1g03630.1 | No alias | component psRPL6 of large ribosomal subunit proteome | 0.08 | Archaeplastida | |
Pp3c11_25510V3.1 | No alias | Ribosomal protein L6 family | 0.06 | Archaeplastida | |
Pp3s128_40V3.1 | No alias | Ribosomal protein L6 family | 0.07 | Archaeplastida | |
Solyc12g100160.3.1 | No alias | component psRPL6 of large ribosomal subunit proteome | 0.05 | Archaeplastida | |
Zm00001e001699_P002 | No alias | component psRPL6 of large ribosomal subunit proteome | 0.06 | Archaeplastida | |
Zm00001e038182_P002 | No alias | component psRPL6 of large ribosomal subunit proteome | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0019843 | rRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Neighborhood |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Neighborhood |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Neighborhood |
CC | GO:0009521 | photosystem | IEP | Neighborhood |
CC | GO:0009523 | photosystem II | IEP | Neighborhood |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
BP | GO:0010207 | photosystem II assembly | IEP | Neighborhood |
BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
MF | GO:0016407 | acetyltransferase activity | IEP | Neighborhood |
MF | GO:0016410 | N-acyltransferase activity | IEP | Neighborhood |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Neighborhood |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
CC | GO:0034357 | photosynthetic membrane | IEP | Neighborhood |
CC | GO:0042651 | thylakoid membrane | IEP | Neighborhood |
CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020040 | Ribosomal_L6_a/b-dom | 120 | 194 |
No external refs found! |