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  5. MA_547683g0010

MA_547683g0010


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_547683g0010
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.04 Archaeplastida
GSVIVT01020666001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
Gb_38376 No alias transcription factor (TCP) 0.02 Archaeplastida
Gb_38379 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g55750.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os03g57190.1 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os09g24480.1 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_52440g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc05g012840.1.1 No alias transcription factor (TCP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 30 140
No external refs found!