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  5. MA_5480780g0010

MA_5480780g0010


Description : Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana (sp|q8vyr5|pp351_arath : 128.0)


Gene families : OG0005875 (Archaeplastida) Phylogenetic Tree(s): OG0005875_tree ,
OG_05_0004866 (LandPlants) Phylogenetic Tree(s): OG_05_0004866_tree ,
OG_06_0006038 (SeedPlants) Phylogenetic Tree(s): OG_06_0006038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5480780g0010
Cluster HCCA: Cluster_454

Target Alias Description ECC score Gene Family Method Actions
AT4G35850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
GSVIVT01032367001 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.03 Archaeplastida
Gb_40110 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.02 Archaeplastida
LOC_Os05g05320.1 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.06 Archaeplastida
Pp3c1_21850V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
Zm00001e027516_P001 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!