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  5. MA_5486g0010

MA_5486g0010


Description : helicase component eIF4A3 of RNA quality control Exon Junction complex


Gene families : OG0000822 (Archaeplastida) Phylogenetic Tree(s): OG0000822_tree ,
OG_05_0005548 (LandPlants) Phylogenetic Tree(s): OG_05_0005548_tree ,
OG_06_0007007 (SeedPlants) Phylogenetic Tree(s): OG_06_0007007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5486g0010
Cluster HCCA: Cluster_536

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g45190.1 No alias helicase component eIF4A3 of RNA quality control Exon... 0.02 Archaeplastida
Smo164382 No alias RNA processing.RNA quality control Exon Junction complex... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 258 366
IPR011545 DEAD/DEAH_box_helicase_dom 57 219
No external refs found!