AT5G54950


Description : Aconitase family protein


Gene families : OG0001305 (Archaeplastida) Phylogenetic Tree(s): OG0001305_tree ,
OG_05_0048086 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042948 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G54950
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030588001 No alias Lipid metabolism.lipid degradation.fatty acid... 0.03 Archaeplastida
Zm00001e008833_P001 No alias aconitase. aconitase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Extended
Type GO Term Name Evidence Source
MF GO:0000182 rDNA binding IEP Neighborhood
BP GO:0000373 Group II intron splicing IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
MF GO:0003998 acylphosphatase activity IEP Neighborhood
MF GO:0004300 enoyl-CoA hydratase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004575 sucrose alpha-glucosidase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005987 sucrose catabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008419 RNA lariat debranching enzyme activity IEP Neighborhood
BP GO:0009313 oligosaccharide catabolic process IEP Neighborhood
CC GO:0009527 plastid outer membrane IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0046352 disaccharide catabolic process IEP Neighborhood
MF GO:0090599 alpha-glucosidase activity IEP Neighborhood
BP GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis IEP Neighborhood
BP GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!