MA_55185g0010


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001331 (LandPlants) Phylogenetic Tree(s): OG_05_0001331_tree ,
OG_06_0000478 (SeedPlants) Phylogenetic Tree(s): OG_06_0000478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_55185g0010
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AT2G18670 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G17245 No alias RING/U-box superfamily protein 0.01 Archaeplastida
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Gb_20666 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Gb_30879 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.04 Archaeplastida
Gb_39486 No alias RING-H2 finger protein ATL16 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g60730.2 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g15110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os09g29310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os12g01750.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10208579g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_1115518g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_117647g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_2679g0010 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_280399g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_38494g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_61349g0010 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_92400g0010 No alias RING-H2-class E3 ligase 0.2 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 83 111
No external refs found!