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  5. MA_552961g0010

MA_552961g0010


Description : RING-H2 finger protein ATL70 OS=Arabidopsis thaliana (sp|q8rx29|atl70_arath : 87.8)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000593 (LandPlants) Phylogenetic Tree(s): OG_05_0000593_tree ,
OG_06_0000328 (SeedPlants) Phylogenetic Tree(s): OG_06_0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_552961g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00240920 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G43420 No alias RING/U-box superfamily protein 0.01 Archaeplastida
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01037651001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g15060.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g35329.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g35440.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g22110.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g39940.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os09g29310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os11g47690.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_9143538g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo402335 No alias Protein degradation.peptide tagging.Ubiquitin... 0.08 Archaeplastida
Solyc02g087040.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc03g115465.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e022538_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e024702_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 98 141
No external refs found!