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  5. AT5G55400

AT5G55400


Description : Actin binding Calponin homology (CH) domain-containing protein


Gene families : OG0001003 (Archaeplastida) Phylogenetic Tree(s): OG0001003_tree ,
OG_05_0001487 (LandPlants) Phylogenetic Tree(s): OG_05_0001487_tree ,
OG_06_0001278 (SeedPlants) Phylogenetic Tree(s): OG_06_0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G55400
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g37580.1 No alias fimbrin actin-crosslinking factor 0.03 Archaeplastida
Solyc06g083070.3.1 No alias fimbrin actin-crosslinking factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0030048 actin filament-based movement RCA Interproscan
BP GO:0051645 Golgi localization RCA Interproscan
BP GO:0051646 mitochondrion localization RCA Interproscan
BP GO:0060151 peroxisome localization RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0002020 protease binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
MF GO:0005245 voltage-gated calcium channel activity IEP Neighborhood
MF GO:0005262 calcium channel activity IEP Neighborhood
MF GO:0005527 macrolide binding IEP Neighborhood
MF GO:0005528 FK506 binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006935 chemotaxis IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008195 phosphatidate phosphatase activity IEP Neighborhood
MF GO:0008235 metalloexopeptidase activity IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010183 pollen tube guidance IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0010375 stomatal complex patterning IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0010962 regulation of glucan biosynthetic process IEP Neighborhood
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015193 L-proline transmembrane transporter activity IEP Neighborhood
CC GO:0016363 nuclear matrix IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019217 regulation of fatty acid metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0022843 voltage-gated cation channel activity IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP Neighborhood
BP GO:0032950 regulation of beta-glucan metabolic process IEP Neighborhood
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP Neighborhood
BP GO:0032952 regulation of (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0032953 regulation of (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0034605 cellular response to heat IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Neighborhood
BP GO:0042330 taxis IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0050918 positive chemotaxis IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
BP GO:0070370 cellular heat acclimation IEP Neighborhood
CC GO:0071944 cell periphery IEP Neighborhood
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP Neighborhood
BP GO:0080092 regulation of pollen tube growth IEP Neighborhood
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Neighborhood
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000122 negative regulation of stomatal complex development IEP Neighborhood
InterPro domains Description Start Stop
IPR001715 CH-domain 270 370
IPR001715 CH-domain 130 239
IPR001715 CH-domain 400 498
IPR001715 CH-domain 517 618
No external refs found!