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  5. MA_566936g0010

MA_566936g0010


Description : no hits & (original description: none)


Gene families : OG0003962 (Archaeplastida) Phylogenetic Tree(s): OG0003962_tree ,
OG_05_0005807 (LandPlants) Phylogenetic Tree(s): OG_05_0005807_tree ,
OG_06_0006787 (SeedPlants) Phylogenetic Tree(s): OG_06_0006787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_566936g0010
Cluster HCCA: Cluster_516

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.06 Archaeplastida
Cpa|evm.model.tig00000704.60 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00000704.61 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Cre07.g344050 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.07 Archaeplastida
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.06 Archaeplastida
Mp8g08070.1 No alias SSU processome assembly factor (TOZ) 0.03 Archaeplastida
Pp3c19_12460V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.08 Archaeplastida
Smo80645 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.07 Archaeplastida
Zm00001e007090_P001 No alias SSU processome assembly factor (TOZ) 0.02 Archaeplastida
Zm00001e041546_P002 No alias SSU processome assembly factor (TOZ) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!