1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_57003g0010

MA_57003g0010


Description : component HOS15 of HDA9-PWR deacetylation complex


Gene families : OG0003435 (Archaeplastida) Phylogenetic Tree(s): OG0003435_tree ,
OG_05_0004300 (LandPlants) Phylogenetic Tree(s): OG_05_0004300_tree ,
OG_06_0004015 (SeedPlants) Phylogenetic Tree(s): OG_06_0004015_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_57003g0010
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000179001 No alias WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc04g078320.4.1 No alias component HOS15 of HDA9-PWR deacetylation complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Neighborhood
CC GO:0000445 THO complex part of transcription export complex IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 186 221
IPR001680 WD40_repeat 80 115
IPR001680 WD40_repeat 36 74
No external refs found!