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AT5G55590 (QRT1)


Aliases : QRT1

Description : Pectin lyase-like superfamily protein


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0015457 (LandPlants) Phylogenetic Tree(s): OG_05_0015457_tree ,
OG_06_0006240 (SeedPlants) Phylogenetic Tree(s): OG_06_0006240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G55590

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01033712001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
LOC_Os03g19610.1 No alias pectin methylesterase 0.01 Archaeplastida
MA_304854g0010 No alias pectin methylesterase 0.01 Archaeplastida
Mp1g00190.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c1_22810V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_35040V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Pp3c8_1680V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Solyc05g052120.4.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009505 plant-type cell wall ISS Interproscan
MF GO:0030599 pectinesterase activity IDA Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
BP GO:0045490 pectin catabolic process IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 82 375
No external refs found!