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  5. MA_57429g0010

MA_57429g0010


Description : DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana (sp|q9sa27|rh36_arath : 165.0)


Gene families : OG0000758 (Archaeplastida) Phylogenetic Tree(s): OG0000758_tree ,
OG_05_0001508 (LandPlants) Phylogenetic Tree(s): OG_05_0001508_tree ,
OG_06_0074553 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_57429g0010
Cluster HCCA: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
Cre10.g420900 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.01 Archaeplastida
Gb_16576 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.03 Archaeplastida
Gb_36370 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os07g43980.1 No alias SSU processome assembly factor (SWA3) 0.02 Archaeplastida
Mp1g19410.1 No alias SSU processome assembly factor (SWA3) 0.02 Archaeplastida
Mp4g20180.1 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis... 0.01 Archaeplastida
Pp3c9_14310V3.1 No alias DEA(D/H)-box RNA helicase family protein 0.02 Archaeplastida
Zm00001e010143_P002 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e034676_P001 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 82 166
No external refs found!