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  5. MA_57453g0010

MA_57453g0010


Description : transcriptional co-repressor (LUG)


Gene families : OG0000691 (Archaeplastida) Phylogenetic Tree(s): OG0000691_tree ,
OG_05_0098663 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0022569 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_57453g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00094620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.LUG... 0.03 Archaeplastida
AT2G32700 LUH LEUNIG_homolog 0.02 Archaeplastida
Gb_02946 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida
Pp3c2_31650V3.1 No alias LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.04 Archaeplastida
Pp3c2_31710V3.1 No alias No annotation 0.03 Archaeplastida
Smo410492 No alias RNA biosynthesis.transcriptional repression.LUG... 0.02 Archaeplastida
Smo79275 No alias RNA biosynthesis.transcriptional repression.LUG... 0.02 Archaeplastida
Solyc02g078000.2.1 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida
Zm00001e020658_P005 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
Zm00001e027845_P004 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 275 312
IPR001680 WD40_repeat 319 354
No external refs found!