AT5G55770


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0001960 (Archaeplastida) Phylogenetic Tree(s): OG0001960_tree ,
OG_05_0001279 (LandPlants) Phylogenetic Tree(s): OG_05_0001279_tree ,
OG_06_0000662 (SeedPlants) Phylogenetic Tree(s): OG_06_0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G55770
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT1G29179 No alias BEST Arabidopsis thaliana protein match is:... 0.03 Archaeplastida
AT1G29180 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT1G44050 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT1G53340 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 Archaeplastida
AT1G61840 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 Archaeplastida
AT1G66440 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT1G66450 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 Archaeplastida
AT2G02610 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT2G02680 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT2G13895 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT3G26550 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 Archaeplastida
AT4G10370 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT4G10560 MEE53 Cysteine/Histidine-rich C1 domain family protein 0.07 Archaeplastida
AT4G13130 No alias Cysteine/Histidine-rich C1 domain family protein 0.11 Archaeplastida
AT5G02340 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT5G02350 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT5G02360 No alias DC1 domain-containing protein 0.03 Archaeplastida
AT5G03360 No alias DC1 domain-containing protein 0.06 Archaeplastida
AT5G37210 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT5G48320 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0007065 male meiosis sister chromatid cohesion IEP Neighborhood
BP GO:0007066 female meiosis sister chromatid cohesion IEP Neighborhood
MF GO:0015171 amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0051177 meiotic sister chromatid cohesion IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
InterPro domains Description Start Stop
IPR004146 DC1 443 493
IPR004146 DC1 387 434
IPR004146 DC1 302 349
IPR004146 DC1 250 292
No external refs found!