1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_5769g0010

MA_5769g0010


Description : Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana (sp|q9s7f4|pp206_arath : 653.0)


Gene families : OG0016322 (Archaeplastida) Phylogenetic Tree(s): OG0016322_tree ,
OG_05_0015873 (LandPlants) Phylogenetic Tree(s): OG_05_0015873_tree ,
OG_06_0015641 (SeedPlants) Phylogenetic Tree(s): OG_06_0015641_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5769g0010
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013416001 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
Gb_15394 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006784 heme a biosynthetic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046160 heme a metabolic process IEP Neighborhood
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 276 304
IPR002885 Pentatricopeptide_repeat 147 175
IPR002885 Pentatricopeptide_repeat 542 590
IPR002885 Pentatricopeptide_repeat 310 357
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 410 458
IPR002885 Pentatricopeptide_repeat 644 691
IPR002885 Pentatricopeptide_repeat 618 642
IPR002885 Pentatricopeptide_repeat 486 512
IPR002885 Pentatricopeptide_repeat 784 813
IPR002885 Pentatricopeptide_repeat 719 742
IPR032867 DYW_dom 818 941
No external refs found!