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MA_5779g0010


Description : Flowering time control protein FCA OS=Arabidopsis thaliana (sp|o04425|fca_arath : 248.0)


Gene families : OG0001519 (Archaeplastida) Phylogenetic Tree(s): OG0001519_tree ,
OG_05_0004668 (LandPlants) Phylogenetic Tree(s): OG_05_0004668_tree ,
OG_06_0005506 (SeedPlants) Phylogenetic Tree(s): OG_06_0005506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5779g0010
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00168380 evm_27.TU.AmTr_v1... Flowering time control protein FCA OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00863 No alias no description available(sp|b8bcz8|fca_orysi : 290.0) 0.03 Archaeplastida
Gb_05124 No alias no description available(sp|b8bcz8|fca_orysi : 224.0) 0.05 Archaeplastida
LOC_Os09g03610.1 No alias no description available(sp|q6k271|fca_orysj : 775.0) 0.05 Archaeplastida
Mp7g15600.1 No alias Flowering time control protein FCA OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g058450.3.1 No alias Flowering time control protein FCA OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e009433_P002 No alias no description available(sp|b8bcz8|fca_orysi : 625.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 102 140
IPR000504 RRM_dom 240 305
IPR001202 WW_dom 739 765
No external refs found!