MA_57835g0010


Description : component RPS15a of SSU proteome


Gene families : OG0001596 (Archaeplastida) Phylogenetic Tree(s): OG0001596_tree ,
OG_05_0001709 (LandPlants) Phylogenetic Tree(s): OG_05_0001709_tree ,
OG_06_0002630 (SeedPlants) Phylogenetic Tree(s): OG_06_0002630_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_57835g0010
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00192110 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
AT1G07770 RPS15A ribosomal protein S15A 0.14 Archaeplastida
AT3G46040 RPS15AD ribosomal protein S15A D 0.08 Archaeplastida
AT5G59850 No alias Ribosomal protein S8 family protein 0.22 Archaeplastida
Cpa|evm.model.tig00000158.110 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 Archaeplastida
Cre05.g234637 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.28 Archaeplastida
GSVIVT01016595001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 Archaeplastida
GSVIVT01025622001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Gb_08537 No alias component RPS15a of SSU proteome 0.15 Archaeplastida
Gb_37191 No alias component RPS15a of SSU proteome 0.05 Archaeplastida
LOC_Os02g27760.1 No alias component RPS15a of SSU proteome 0.24 Archaeplastida
LOC_Os07g10720.1 No alias component RPS15a of SSU proteome 0.25 Archaeplastida
Mp8g06510.1 No alias component RPS15a of SSU proteome 0.26 Archaeplastida
Mp8g13010.1 No alias component RPS15a of SSU proteome 0.25 Archaeplastida
Pp3c11_10490V3.1 No alias Ribosomal protein S8 family protein 0.14 Archaeplastida
Pp3c1_4290V3.1 No alias Ribosomal protein S8 family protein 0.23 Archaeplastida
Pp3c2_32050V3.1 No alias Ribosomal protein S8 family protein 0.24 Archaeplastida
Pp3c3_1140V3.1 No alias ribosomal protein S15A 0.21 Archaeplastida
Pp3c4_27540V3.1 No alias Ribosomal protein S8 family protein 0.28 Archaeplastida
Pp3c5_5750V3.1 No alias ribosomal protein S15A 0.15 Archaeplastida
Smo228163 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
Solyc04g150158.1.1 No alias component RPS15a of SSU proteome 0.16 Archaeplastida
Solyc04g150159.1.1 No alias component RPS15a of SSU proteome 0.03 Archaeplastida
Zm00001e016394_P001 No alias component RPS15a of SSU proteome 0.24 Archaeplastida
Zm00001e024375_P001 No alias no hits & (original description: none) 0.16 Archaeplastida
Zm00001e026115_P001 No alias component RPS15a of SSU proteome 0.18 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 2 117
No external refs found!