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Description : Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana (sp|q9zuw3|pp172_arath : 509.0)
Gene families : OG0109569 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0093582 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074562 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_58353g0010 | |
| Cluster | HCCA: Cluster_399 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Neighborhood |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Neighborhood |
| MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Neighborhood |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Neighborhood |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Neighborhood |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0070085 | glycosylation | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 351 | 398 |
| IPR002885 | Pentatricopeptide_repeat | 156 | 204 |
| IPR032867 | DYW_dom | 687 | 800 |
| IPR002885 | Pentatricopeptide_repeat | 486 | 499 |
| IPR002885 | Pentatricopeptide_repeat | 510 | 536 |
| IPR002885 | Pentatricopeptide_repeat | 260 | 288 |
| IPR002885 | Pentatricopeptide_repeat | 577 | 601 |
| IPR002885 | Pentatricopeptide_repeat | 291 | 319 |
| IPR002885 | Pentatricopeptide_repeat | 232 | 257 |
| IPR002885 | Pentatricopeptide_repeat | 427 | 454 |
| IPR002885 | Pentatricopeptide_repeat | 455 | 485 |
| IPR002885 | Pentatricopeptide_repeat | 322 | 347 |
| No external refs found! |