MA_58375g0020

Description : component CAP-H of condensin I complex

Gene families : OG0003391 (Archaeplastida) Phylogenetic Tree(s): OG0003391_tree ,
OG_05_0098696 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0080168 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_58375g0020
Cluster	HCCA: Cluster_448

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021462.43	No alias	Cell cycle.mitosis and meiosis.chromatin...	0.01	Archaeplastida
Cre13.g589300	No alias	Cell cycle.mitosis and meiosis.chromatin...	0.01	Archaeplastida
MA_10431431g0010	No alias	component CAP-H of condensin I complex	0.03	Archaeplastida
MA_784139g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp1g27450.1	No alias	component CAP-H of condensin I complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000796	condensin complex	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006323	DNA packaging	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007076	mitotic chromosome condensation	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0030261	chromosome condensation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003697	single-stranded DNA binding	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR022816	Condensin_barren_su2	25	84

External Links

No external refs found!

MA_58375g0020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation