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  5. MA_5913418g0010

MA_5913418g0010


Description : no hits & (original description: none)


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0000380 (SeedPlants) Phylogenetic Tree(s): OG_06_0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5913418g0010
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00173800 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.02 Archaeplastida
AMTR_s00059p00088650 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00059p00097920 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00076p00180150 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AT1G60390 PG1 polygalacturonase 1 0.03 Archaeplastida
AT1G70370 PG2 polygalacturonase 2 0.05 Archaeplastida
GSVIVT01035686001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01035693001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035702001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_32944 No alias Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis... 0.02 Archaeplastida
Gb_39304 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os01g53240.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os04g14990.1 No alias BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os05g13490.1 No alias BURP domain-containing protein 8 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os06g13240.1 No alias BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os06g19740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g29200.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
LOC_Os08g38810.1 No alias BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os09g16010.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
LOC_Os10g26940.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
LOC_Os11g06980.1 No alias BURP domain-containing protein 17 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_19057g0010 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
MA_462957g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7645347g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g109500.4.1 No alias BURP domain protein USPL1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g062300.3.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc02g062310.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc08g068130.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Solyc08g068140.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003438_P003 No alias Protein RAFTIN 1A OS=Triticum aestivum... 0.02 Archaeplastida
Zm00001e003891_P006 No alias BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 1 94
No external refs found!