AT1G26410

Description : FAD-binding Berberine family protein

Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G26410
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00124850	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
AMTR_s00032p00227420	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
AMTR_s00038p00162870	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
AMTR_s00038p00163720	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
AMTR_s00038p00163940	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
AMTR_s00038p00164300	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
AT1G30730	No alias	FAD-binding Berberine family protein	0.05	Archaeplastida
AT5G44390	No alias	FAD-binding Berberine family protein	0.07	Archaeplastida
GSVIVT01015790001	No alias	Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01020745001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
GSVIVT01020746001	No alias	Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01021720001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
GSVIVT01021723001	No alias	Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01021734001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Gb_03609	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Gb_21183	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Gb_21185	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Gb_21186	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Gb_21188	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Gb_24403	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Gb_24415	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Gb_24416	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os06g35560.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
LOC_Os06g35630.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os06g35700.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.06	Archaeplastida
LOC_Os08g06190.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
MA_10144220g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
MA_10428737g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
MA_228933g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
MA_5468901g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
MA_8334627g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
MA_9511312g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Mp7g02610.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Solyc02g022860.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Solyc02g069690.1.1	No alias	Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana...	0.06	Archaeplastida
Solyc02g070070.1.1	No alias	Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc02g070090.1.1	No alias	Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana...	0.06	Archaeplastida
Solyc02g070110.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
Solyc02g070130.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Solyc02g070150.1.1	No alias	Berberine bridge enzyme-like 28 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc02g070160.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Solyc02g070180.3.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.06	Archaeplastida
Solyc06g065060.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.06	Archaeplastida
Solyc09g072660.4.1	No alias	Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc10g054540.1.1	No alias	Berberine bridge enzyme-like 26 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e021429_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Zm00001e021718_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e030681_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Zm00001e035611_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
Zm00001e035614_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
Zm00001e037256_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
Zm00001e042367_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
Zm00001e042369_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0009055	electron transfer activity	ISS	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0036294	cellular response to decreased oxygen levels	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071453	cellular response to oxygen levels	None	Extended
BP	GO:0071456	cellular response to hypoxia	IEP	Interproscan

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000149	SNARE binding	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005217	intracellular ligand-gated ion channel activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005615	extracellular space	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006560	proline metabolic process	IEP	Neighborhood
BP	GO:0006561	proline biosynthetic process	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006874	cellular calcium ion homeostasis	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009403	toxin biosynthetic process	IEP	Neighborhood
BP	GO:0009617	response to bacterium	IEP	Neighborhood
BP	GO:0009682	induced systemic resistance	IEP	Neighborhood
BP	GO:0009700	indole phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0009866	induced systemic resistance, ethylene mediated signaling pathway	IEP	Neighborhood
BP	GO:0009871	jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	IEP	Neighborhood
BP	GO:0010120	camalexin biosynthetic process	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0046217	indole phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0052314	phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0052315	phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0052317	camalexin metabolic process	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055074	calcium ion homeostasis	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0072503	cellular divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
BP	GO:1900055	regulation of leaf senescence	IEP	Neighborhood
BP	GO:1900056	negative regulation of leaf senescence	IEP	Neighborhood
BP	GO:1905622	negative regulation of leaf development	IEP	Neighborhood
BP	GO:2000024	regulation of leaf development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	103	237
IPR012951	BBE	490	547

External Links

No external refs found!

AT1G26410

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation