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  5. MA_597g0020

MA_597g0020


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 499.0)


Gene families : OG0008251 (Archaeplastida) Phylogenetic Tree(s): OG0008251_tree ,
OG_05_0008870 (LandPlants) Phylogenetic Tree(s): OG_05_0008870_tree ,
OG_06_0074578 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_597g0020
Cluster HCCA: Cluster_540

Target Alias Description ECC score Gene Family Method Actions
Gb_02375 No alias RNA editing factor (MEF19) 0.06 Archaeplastida
Gb_08051 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 513 544
IPR002885 Pentatricopeptide_repeat 622 646
IPR002885 Pentatricopeptide_repeat 295 323
IPR002885 Pentatricopeptide_repeat 418 446
IPR002885 Pentatricopeptide_repeat 356 385
IPR002885 Pentatricopeptide_repeat 325 353
IPR002885 Pentatricopeptide_repeat 387 415
IPR002885 Pentatricopeptide_repeat 221 269
IPR002885 Pentatricopeptide_repeat 547 595
IPR002885 Pentatricopeptide_repeat 121 168
IPR002885 Pentatricopeptide_repeat 448 493
No external refs found!