MA_59925g0010


Description : Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum (sp|p62981|rs27a_soltu : 146.0)


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000113 (LandPlants) Phylogenetic Tree(s): OG_05_0000113_tree ,
OG_06_0074585 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_59925g0010
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Smo163447 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Solyc11g005650.1.1 No alias Ubiquitin-60S ribosomal protein L40 OS=Brassica rapa... 0.04 Archaeplastida
Zm00001e010317_P001 No alias component RPL40 of LSU proteome component 0.03 Archaeplastida
Zm00001e035030_P001 No alias component RPL40 of LSU proteome component 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
No external refs found!