AT5G57210

Description : Ypt/Rab-GAP domain of gyp1p superfamily protein

Gene families : OG0004870 (Archaeplastida) Phylogenetic Tree(s): OG0004870_tree ,
OG_05_0004250 (LandPlants) Phylogenetic Tree(s): OG_05_0004250_tree ,
OG_06_0004107 (SeedPlants) Phylogenetic Tree(s): OG_06_0004107_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G57210
Cluster	HCCA: Cluster_245

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT4G29950	No alias	Ypt/Rab-GAP domain of gyp1p superfamily protein	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
CC	GO:0009505	plant-type cell wall	IEP	Neighborhood
MF	GO:0015925	galactosidase activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0035091	phosphatidylinositol binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000195	Rab-GTPase-TBC_dom	112	172
IPR000195	Rab-GTPase-TBC_dom	271	374

External Links

No external refs found!