1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_62112g0010

MA_62112g0010


Description : pectate lyase


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0023446 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0022484 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_62112g0010
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AT3G27400 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT4G13210 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT4G22080 RHS14 root hair specific 14 0.03 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01003984001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
Gb_02248 No alias pectate lyase 0.03 Archaeplastida
Gb_19802 No alias pectate lyase 0.04 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.05 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.06 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.06 Archaeplastida
MA_1164682g0010 No alias pectate lyase 0.03 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.04 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.04 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.05 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.05 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.06 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c17_16370V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c1_10180V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c1_10470V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c21_16990V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c22_19760V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c22_19780V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c2_9460V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Pp3c3_20320V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3s38_30V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
Solyc03g111690.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc06g071840.3.1 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g061890.3.1 No alias pectate lyase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002022 Pec_lyase 56 196
No external refs found!