AT5G57320 (VLN5)

Aliases : VLN5

Description : villin, putative

Gene families : OG0000669 (Archaeplastida) Phylogenetic Tree(s): OG0000669_tree ,
OG_05_0000929 (LandPlants) Phylogenetic Tree(s): OG_05_0000929_tree ,
OG_06_0002995 (SeedPlants) Phylogenetic Tree(s): OG_06_0002995_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G57320
Cluster	HCCA: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00248490	evm_27.TU.AmTr_v1...	Cytoskeleton.microfilament network.actin...	0.02	Archaeplastida
Cre12.g524400	No alias	No description available	0.04	Archaeplastida
GSVIVT01024752001	No alias	Cytoskeleton.microfilament network.actin...	0.03	Archaeplastida
LOC_Os03g24220.2	No alias	villin actin-crosslinking factor	0.03	Archaeplastida
LOC_Os04g51440.1	No alias	villin actin-crosslinking factor	0.06	Archaeplastida
MA_10430359g0030	No alias	Villin-2 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Solyc10g079400.3.1	No alias	villin actin-crosslinking factor	0.05	Archaeplastida
Solyc10g080100.3.1	No alias	villin actin-crosslinking factor	0.02	Archaeplastida
Zm00001e001712_P002	No alias	villin actin-crosslinking factor	0.02	Archaeplastida
Zm00001e007033_P001	No alias	villin actin-crosslinking factor	0.04	Archaeplastida
Zm00001e010507_P006	No alias	villin actin-crosslinking factor	0.02	Archaeplastida
Zm00001e018617_P001	No alias	villin actin-crosslinking factor	0.02	Archaeplastida
Zm00001e038175_P001	No alias	villin actin-crosslinking factor	0.03	Archaeplastida
Zm00001e041587_P002	No alias	no hits & (original description: none)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	ISS	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	Neighborhood
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Neighborhood
BP	GO:0002790	peptide secretion	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003785	actin monomer binding	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005093	Rab GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
CC	GO:0005884	actin filament	IEP	Neighborhood
CC	GO:0005938	cell cortex	IEP	Neighborhood
BP	GO:0006874	cellular calcium ion homeostasis	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007015	actin filament organization	IEP	Neighborhood
BP	GO:0007204	positive regulation of cytosolic calcium ion concentration	IEP	Neighborhood
BP	GO:0009306	protein secretion	IEP	Neighborhood
BP	GO:0009555	pollen development	IEP	Neighborhood
BP	GO:0009566	fertilization	IEP	Neighborhood
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009826	unidimensional cell growth	IEP	Neighborhood
BP	GO:0009827	plant-type cell wall modification	IEP	Neighborhood
BP	GO:0009860	pollen tube growth	IEP	Neighborhood
BP	GO:0009865	pollen tube adhesion	IEP	Neighborhood
BP	GO:0009932	cell tip growth	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0010208	pollen wall assembly	IEP	Neighborhood
BP	GO:0010584	pollen exine formation	IEP	Neighborhood
BP	GO:0010646	regulation of cell communication	IEP	Neighborhood
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	Neighborhood
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
CC	GO:0016324	apical plasma membrane	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
BP	GO:0017157	regulation of exocytosis	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
BP	GO:0019953	sexual reproduction	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
BP	GO:0023051	regulation of signaling	IEP	Neighborhood
BP	GO:0030029	actin filament-based process	IEP	Neighborhood
BP	GO:0030036	actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0030048	actin filament-based movement	IEP	Neighborhood
CC	GO:0030133	transport vesicle	IEP	Neighborhood
CC	GO:0030139	endocytic vesicle	IEP	Neighborhood
CC	GO:0030427	site of polarized growth	IEP	Neighborhood
MF	GO:0030551	cyclic nucleotide binding	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Neighborhood
CC	GO:0031410	cytoplasmic vesicle	IEP	Neighborhood
CC	GO:0031982	vesicle	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
BP	GO:0032989	cellular component morphogenesis	IEP	Neighborhood
BP	GO:0035023	regulation of Rho protein signal transduction	IEP	Neighborhood
BP	GO:0035024	negative regulation of Rho protein signal transduction	IEP	Neighborhood
CC	GO:0035838	growing cell tip	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
CC	GO:0042995	cell projection	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043244	regulation of protein complex disassembly	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
CC	GO:0044463	cell projection part	IEP	Neighborhood
BP	GO:0044703	multi-organism reproductive process	IEP	Neighborhood
CC	GO:0045177	apical part of cell	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Neighborhood
BP	GO:0046580	negative regulation of Ras protein signal transduction	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0048229	gametophyte development	IEP	Neighborhood
BP	GO:0048588	developmental cell growth	IEP	Neighborhood
BP	GO:0048589	developmental growth	IEP	Neighborhood
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0048868	pollen tube development	IEP	Neighborhood
BP	GO:0048869	cellular developmental process	IEP	Neighborhood
BP	GO:0050848	regulation of calcium-mediated signaling	IEP	Neighborhood
BP	GO:0050850	positive regulation of calcium-mediated signaling	IEP	Neighborhood
BP	GO:0051046	regulation of secretion	IEP	Neighborhood
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Neighborhood
BP	GO:0051058	negative regulation of small GTPase mediated signal transduction	IEP	Neighborhood
CC	GO:0051286	cell tip	IEP	Neighborhood
BP	GO:0051480	regulation of cytosolic calcium ion concentration	IEP	Neighborhood
BP	GO:0051648	vesicle localization	IEP	Neighborhood
BP	GO:0051650	establishment of vesicle localization	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055074	calcium ion homeostasis	IEP	Neighborhood
BP	GO:0060284	regulation of cell development	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Neighborhood
CC	GO:0070382	exocytic vesicle	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0072503	cellular divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0080092	regulation of pollen tube growth	IEP	Neighborhood
CC	GO:0090404	pollen tube tip	IEP	Neighborhood
CC	GO:0090406	pollen tube	IEP	Neighborhood
BP	GO:0097435	supramolecular fiber organization	IEP	Neighborhood
CC	GO:0097708	intracellular vesicle	IEP	Neighborhood
CC	GO:0098590	plasma membrane region	IEP	Neighborhood
BP	GO:0098609	cell-cell adhesion	IEP	Neighborhood
BP	GO:0098740	multi organism cell adhesion	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
CC	GO:0099080	supramolecular complex	IEP	Neighborhood
CC	GO:0099081	supramolecular polymer	IEP	Neighborhood
CC	GO:0099503	secretory vesicle	IEP	Neighborhood
CC	GO:0099512	supramolecular fiber	IEP	Neighborhood
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Neighborhood
CC	GO:0099568	cytoplasmic region	IEP	Neighborhood
CC	GO:0120025	plasma membrane bounded cell projection	IEP	Neighborhood
CC	GO:0120038	plasma membrane bounded cell projection part	IEP	Neighborhood
BP	GO:1901879	regulation of protein depolymerization	IEP	Neighborhood
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Neighborhood
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	Neighborhood
BP	GO:1903530	regulation of secretion by cell	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003128	Villin_headpiece	927	962
IPR007123	Gelsolin-like_dom	149	209
IPR007123	Gelsolin-like_dom	643	714
IPR007123	Gelsolin-like_dom	269	333
IPR007123	Gelsolin-like_dom	29	111

External Links

No external refs found!

AT5G57320 (VLN5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation