AT5G57540 (XTH13, AtXTH13)

Aliases : XTH13, AtXTH13

Description : xyloglucan endotransglucosylase/hydrolase 13

Gene families : OG0000045 (Archaeplastida) Phylogenetic Tree(s): OG0000045_tree ,
OG_05_0000041 (LandPlants) Phylogenetic Tree(s): OG_05_0000041_tree ,
OG_06_0000091 (SeedPlants) Phylogenetic Tree(s): OG_06_0000091_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G57540
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00167480	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
AMTR_s00019p00242980	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
AMTR_s00048p00113910	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
AMTR_s00062p00016540	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
AMTR_s00062p00020460	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
AMTR_s00065p00199270	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	Archaeplastida
AMTR_s00065p00199520	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	Archaeplastida
AMTR_s00453p00010790	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
AT1G10550	XET, XTH33	xyloglucan:xyloglucosyl transferase 33	0.05	Archaeplastida
AT1G11545	XTH8	xyloglucan endotransglucosylase/hydrolase 8	0.04	Archaeplastida
AT1G32170	XTR4, XTH30	xyloglucan endotransglucosylase/hydrolase 30	0.06	Archaeplastida
AT1G65310	XTH17, ATXTH17	xyloglucan endotransglucosylase/hydrolase 17	0.09	Archaeplastida
AT2G06850	EXGT-A1, XTH4, EXT	xyloglucan endotransglucosylase/hydrolase 4	0.05	Archaeplastida
AT2G14620	XTH10	xyloglucan endotransglucosylase/hydrolase 10	0.06	Archaeplastida
AT2G36870	XTH32	xyloglucan endotransglucosylase/hydrolase 32	0.03	Archaeplastida
AT4G13080	XTH1	xyloglucan endotransglucosylase/hydrolase 1	0.04	Archaeplastida
AT4G13090	XTH2	xyloglucan endotransglucosylase/hydrolase 2	0.03	Archaeplastida
AT4G25810	XTR6, XTH23	xyloglucan endotransglycosylase 6	0.04	Archaeplastida
AT4G30280	XTH18, ATXTH18	xyloglucan endotransglucosylase/hydrolase 18	0.04	Archaeplastida
AT4G30290	XTH19, ATXTH19	xyloglucan endotransglucosylase/hydrolase 19	0.08	Archaeplastida
AT4G37800	XTH7	xyloglucan endotransglucosylase/hydrolase 7	0.03	Archaeplastida
GSVIVT01004746001	No alias	Putative xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
GSVIVT01029171001	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
Gb_00044	No alias	xyloglucan endotransglucosylase/hydrolase	0.02	Archaeplastida
Gb_07224	No alias	xyloglucan endotransglucosylase/hydrolase	0.04	Archaeplastida
Gb_10644	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
Gb_10648	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
Gb_22346	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	Archaeplastida
Gb_22359	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
Gb_32543	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
Gb_33516	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
LOC_Os02g57770.1	No alias	xyloglucan endotransglucosylase/hydrolase	0.01	Archaeplastida
LOC_Os03g01800.1	No alias	xyloglucan endotransglucosylase/hydrolase	0.03	Archaeplastida
LOC_Os03g13570.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
LOC_Os03g63760.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
LOC_Os06g13040.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	Archaeplastida
LOC_Os06g48160.1	No alias	Xyloglucan endotransglucosylase/hydrolase protein 22...	0.02	Archaeplastida
LOC_Os07g29750.1	No alias	xyloglucan endotransglucosylase/hydrolase	0.04	Archaeplastida
LOC_Os07g34580.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
LOC_Os10g02770.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
LOC_Os11g33270.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
MA_10429505g0010	No alias	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.03	Archaeplastida
MA_10429722g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
MA_10429722g0020	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10430703g0010	No alias	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.04	Archaeplastida
MA_10434153g0020	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	Archaeplastida
MA_10436348g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
MA_144503g0010	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.05	Archaeplastida
MA_14679g0010	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
MA_15222g0020	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
MA_17973g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
MA_20669g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
MA_208401g0010	No alias	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.07	Archaeplastida
MA_254951g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
MA_275059g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.07	Archaeplastida
MA_306910g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
MA_31571g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
MA_342978g0010	No alias	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.07	Archaeplastida
MA_358917g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
MA_465930g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
MA_476450g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
MA_70487g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
MA_81735g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.01	Archaeplastida
Mp2g18350.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Archaeplastida
Mp2g21490.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	Archaeplastida
Mp3g10340.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
Mp8g10370.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
Pp3c11_15280V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 9	0.01	Archaeplastida
Pp3c16_20960V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Archaeplastida
Pp3c25_10500V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.05	Archaeplastida
Pp3c3_9730V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 28	0.02	Archaeplastida
Pp3c6_14940V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 7	0.03	Archaeplastida
Pp3c6_490V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Archaeplastida
Pp3c6_600V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Archaeplastida
Smo119243	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
Smo233454	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.07	Archaeplastida
Smo403283	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.07	Archaeplastida
Smo422922	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Archaeplastida
Smo426178	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.07	Archaeplastida
Solyc01g081060.4.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
Solyc01g099630.4.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase 1...	0.03	Archaeplastida
Solyc05g046290.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
Solyc07g006850.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	Archaeplastida
Solyc07g006860.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
Solyc07g055990.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.07	Archaeplastida
Solyc10g005350.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
Solyc12g007250.1.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.16	Archaeplastida
Solyc12g007260.2.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.12	Archaeplastida
Solyc12g007270.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.17	Archaeplastida
Zm00001e007028_P001	No alias	Xyloglucan endotransglucosylase/hydrolase protein 24...	0.03	Archaeplastida
Zm00001e015512_P001	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010054	trichoblast differentiation	RCA	Interproscan
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010411	xyloglucan metabolic process	IDA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	ISS	Interproscan
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
BP	GO:0000902	cell morphogenesis	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005548	phospholipid transporter activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0006829	zinc ion transport	IEP	Neighborhood
BP	GO:0007043	cell-cell junction assembly	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
MF	GO:0008526	phosphatidylinositol transporter activity	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
CC	GO:0009505	plant-type cell wall	IEP	Neighborhood
CC	GO:0009531	secondary cell wall	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0009808	lignin metabolic process	IEP	Neighborhood
BP	GO:0009826	unidimensional cell growth	IEP	Neighborhood
BP	GO:0009828	plant-type cell wall loosening	IEP	Neighborhood
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
MF	GO:0009927	histidine phosphotransfer kinase activity	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
BP	GO:0010466	negative regulation of peptidase activity	IEP	Neighborhood
BP	GO:0010951	negative regulation of endopeptidase activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
BP	GO:0030162	regulation of proteolysis	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0032989	cellular component morphogenesis	IEP	Neighborhood
BP	GO:0034329	cell junction assembly	IEP	Neighborhood
BP	GO:0034330	cell junction organization	IEP	Neighborhood
BP	GO:0035864	response to potassium ion	IEP	Neighborhood
BP	GO:0035865	cellular response to potassium ion	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
MF	GO:0042802	identical protein binding	IEP	Neighborhood
MF	GO:0042803	protein homodimerization activity	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
CC	GO:0044426	cell wall part	IEP	Neighborhood
CC	GO:0044462	external encapsulating structure part	IEP	Neighborhood
BP	GO:0045216	cell-cell junction organization	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
BP	GO:0045861	negative regulation of proteolysis	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
CC	GO:0048226	Casparian strip	IEP	Neighborhood
BP	GO:0048364	root development	IEP	Neighborhood
BP	GO:0048527	lateral root development	IEP	Neighborhood
BP	GO:0048528	post-embryonic root development	IEP	Neighborhood
BP	GO:0048588	developmental cell growth	IEP	Neighborhood
BP	GO:0048589	developmental growth	IEP	Neighborhood
BP	GO:0048766	root hair initiation	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Neighborhood
BP	GO:0052547	regulation of peptidase activity	IEP	Neighborhood
BP	GO:0052548	regulation of endopeptidase activity	IEP	Neighborhood
BP	GO:0055062	phosphate ion homeostasis	IEP	Neighborhood
BP	GO:0055083	monovalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0071365	cellular response to auxin stimulus	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	Neighborhood
MF	GO:0072509	divalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0072732	cellular response to calcium ion starvation	IEP	Neighborhood
BP	GO:0090696	post-embryonic plant organ development	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR010713	XET_C	237	281
IPR000757	GH16	27	206

External Links

No external refs found!

AT5G57540 (XTH13, AtXTH13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation