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  5. MA_634003g0010

MA_634003g0010


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 185.0)


Gene families : OG0000380 (Archaeplastida) Phylogenetic Tree(s): OG0000380_tree ,
OG_05_0000225 (LandPlants) Phylogenetic Tree(s): OG_05_0000225_tree ,
OG_06_0000140 (SeedPlants) Phylogenetic Tree(s): OG_06_0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_634003g0010
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00197160 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_14478 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c4_25840V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc03g111780.1.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 31 59
IPR001680 WD40_repeat 168 200
IPR001680 WD40_repeat 66 101
No external refs found!