1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_6474333g0010

MA_6474333g0010


Description : Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 265.3) & Probable pectate lyase 20 OS=Arabidopsis thaliana (sp|q93wf1|ply20_arath : 236.0)


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0013804 (LandPlants) Phylogenetic Tree(s): OG_05_0013804_tree ,
OG_06_0012737 (SeedPlants) Phylogenetic Tree(s): OG_06_0012737_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6474333g0010
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00186640 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AMTR_s00171p00044290 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AT1G11920 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G27400 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G09280 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.04 Archaeplastida
MA_1164682g0010 No alias pectate lyase 0.04 Archaeplastida
MA_474372g0010 No alias pectate lyase 0.11 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.05 Archaeplastida
Pp3c1_4040V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 3 144
No external refs found!