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  5. MA_6475030g0010

MA_6475030g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000056 (SeedPlants) Phylogenetic Tree(s): OG_06_0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6475030g0010

Target Alias Description ECC score Gene Family Method Actions
AT3G03550 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G10160 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.01 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os01g11490.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os03g22080.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g11860.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os06g08820.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os12g40460.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_17390g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e009017_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e041824_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 14 57
No external refs found!