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  5. MA_64923g0010

MA_64923g0010


Description : component RPL17 of LSU proteome component


Gene families : OG0001876 (Archaeplastida) Phylogenetic Tree(s): OG0001876_tree ,
OG_05_0001644 (LandPlants) Phylogenetic Tree(s): OG_05_0001644_tree ,
OG_06_0001980 (SeedPlants) Phylogenetic Tree(s): OG_06_0001980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_64923g0010
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00159640 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
AMTR_s00013p00211990 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
AMTR_s00013p00223470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
AMTR_s00013p00224030 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
AMTR_s00013p00225150 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
AT1G27400 No alias Ribosomal protein L22p/L17e family protein 0.36 Archaeplastida
AT1G67430 No alias Ribosomal protein L22p/L17e family protein 0.25 Archaeplastida
Cpa|evm.model.tig00001215.8 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Cre13.g568900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.32 Archaeplastida
GSVIVT01008528001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 Archaeplastida
GSVIVT01010449001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
GSVIVT01010450001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 Archaeplastida
LOC_Os08g41810.1 No alias component RPL17 of LSU proteome component 0.17 Archaeplastida
LOC_Os09g08430.1 No alias component RPL17 of LSU proteome component 0.28 Archaeplastida
Mp1g10230.1 No alias component RPL17 of LSU proteome component 0.36 Archaeplastida
Pp3c11_5840V3.1 No alias Ribosomal protein L22p/L17e family protein 0.33 Archaeplastida
Pp3c1_6650V3.1 No alias Ribosomal protein L22p/L17e family protein 0.18 Archaeplastida
Pp3c2_29840V3.1 No alias Ribosomal protein L22p/L17e family protein 0.31 Archaeplastida
Pp3c7_25220V3.1 No alias Ribosomal protein L22p/L17e family protein 0.15 Archaeplastida
Pp3c7_25240V3.1 No alias Ribosomal protein L22p/L17e family protein 0.32 Archaeplastida
Smo96251 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
Solyc03g111230.4.1 No alias component RPL17 of LSU proteome component 0.08 Archaeplastida
Solyc06g071870.3.1 No alias component RPL17 of LSU proteome component 0.31 Archaeplastida
Solyc06g071880.4.1 No alias component RPL17 of LSU proteome component 0.23 Archaeplastida
Zm00001e003661_P001 No alias component RPL17 of LSU proteome component 0.35 Archaeplastida
Zm00001e005470_P001 No alias component RPL17 of LSU proteome component 0.03 Archaeplastida
Zm00001e021953_P003 No alias component RPL17 of LSU proteome component 0.18 Archaeplastida
Zm00001e026882_P002 No alias component RPL17 of LSU proteome component 0.16 Archaeplastida
Zm00001e031261_P001 No alias component RPL17 of LSU proteome component 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Neighborhood
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006547 histidine metabolic process IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:0052803 imidazole-containing compound metabolic process IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 92 227
No external refs found!