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MA_6509g0020


Description : Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana (sp|q8gyp6|ppr49_arath : 137.0)


Gene families : OG0001265 (Archaeplastida) Phylogenetic Tree(s): OG0001265_tree ,
OG_05_0000728 (LandPlants) Phylogenetic Tree(s): OG_05_0000728_tree ,
OG_06_0001775 (SeedPlants) Phylogenetic Tree(s): OG_06_0001775_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6509g0020
Cluster HCCA: Cluster_420

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00079500 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g56030,... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 515 539
IPR002885 Pentatricopeptide_repeat 690 716
IPR002885 Pentatricopeptide_repeat 549 575
IPR002885 Pentatricopeptide_repeat 255 280
IPR002885 Pentatricopeptide_repeat 579 627
No external refs found!